Conjugate prior

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In Bayesian probability theory, a class of prior probability distributions p(θ) is said to be conjugate to a class of likelihood functions p(x|θ) if the resulting posterior distributions p(θ|x) are in the same family as p(θ). For example, the Gaussian family is conjugate to itself (or self-conjugate): if the likelihood function is Gaussian, choosing a Gaussian prior will ensure that the posterior distribution is also Gaussian. The concept, as well as the term "conjugate prior", were introduced by Howard Raiffa and Robert Schlaifer in their work on Bayesian decision theory.[1] A similar concept had been discovered independently by George Alfred Barnard.[2]

Consider the general problem of inferring a distribution for a parameter θ given some datum or data x. From Bayes' theorem, the posterior distribution is calculated from the prior p(θ) and the likelihood function Failed to parse (Missing texvc executable; please see math/README to configure.): \theta \mapsto p(x\mid\theta)\!

as
Failed to parse (Missing texvc executable; please see math/README to configure.): p(\theta|x) = \frac{p(x|\theta) \, p(\theta)} {\int p(x|\theta) \, p(\theta) \, d\theta}. \!


Let the likelihood function be considered fixed; the likelihood function is usually well-determined from a statement of the data-generating process. It is clear that different choices of the prior distribution p(θ) may make the integral more or less difficult to calculate, and the product p(x|θ) × p(θ) may take one algebraic form or another. For certain choices of the prior, the posterior has the same algebraic form as the prior (generally with different parameters). Such a choice is a conjugate prior.

A conjugate prior is an algebraic convenience: otherwise a difficult numerical integration may be necessary.

All members of the exponential family have conjugate priors. See Gelman et al.[3] for a catalog.

Contents

Example

For a random variable which is a Bernoulli trial with unknown probability of success q in {0,1}, the usual conjugate prior is the beta distribution with

Failed to parse (Missing texvc executable; please see math/README to configure.): p(q=x) = {x^{\alpha-1}(1-x)^{\beta-1} \over \Beta(\alpha,\beta)}

where Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha

and Failed to parse (Missing texvc executable; please see math/README to configure.): \beta
are chosen to reflect any existing belief or information (Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha
= 1 and Failed to parse (Missing texvc executable; please see math/README to configure.): \beta
= 1 would give a uniform distribution) and Β(Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha

Failed to parse (Missing texvc executable; please see math/README to configure.): \beta ) is the Beta function acting as a normalising constant.

If we then sample this random variable and get s successes and f failures, we have

Failed to parse (Missing texvc executable; please see math/README to configure.): P(s,f|q=x) = {s+f \choose s} x^s(1-x)^f,
Failed to parse (Missing texvc executable; please see math/README to configure.): p(q=x|s,f) = {{{s+f \choose s} x^{s+\alpha-1}(1-x)^{f+\beta-1} / \Beta(\alpha,\beta)} \over \int_{y=0}^1 \left({s+f \choose s} y^{s+\alpha-1}(1-y)^{f+\beta-1} / \Beta(\alpha,\beta)\right) dy} = {x^{s+\alpha-1}(1-x)^{f+\beta-1} \over \Beta(s+\alpha,f+\beta)} ,


which is another Beta distribution with a simple change to the parameters. This posterior distribution could then be used as the prior for more samples, with the parameters simply adding each extra piece of information as it comes.

Table of conjugate distributions

Let n denote the number of observations

Discrete likelihood distributions

Likelihood Model parameters Conjugate prior distribution Prior hyperparameters Posterior hyperparameters
Bernoulli p (probability) Beta Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha,\ \beta\! Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha + \sum_{i=1}^n x_i,\ \beta + n - \sum_{i=1}^n x_i\!
Binomial p (probability) Beta Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha,\ \beta\! Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha + \sum_{i=1}^n x_i,\ \beta + \sum_{i=1}^nN_i - x_i\!
Poisson λ (rate) Gamma Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha,\ \beta\!
 [4]
Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha + \sum_{i=1}^n x_i,\ \beta + n\!
Multinomial p (probability vector) Dirichlet Failed to parse (Missing texvc executable; please see math/README to configure.): \vec{\alpha}\! Failed to parse (Missing texvc executable; please see math/README to configure.): \vec{\alpha}+\sum_{i=1}^n\vec{x}^{\,(i)}\!
Geometric p0 (probability) Beta Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha,\ \beta\! Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha + n,\ \beta + \sum_{i=1}^n x_i\!

Continuous likelihood distributions

Likelihood Model parameters Conjugate prior distribution Prior hyperparameters Posterior hyperparameters
Uniform Failed to parse (Missing texvc executable; please see math/README to configure.): U(0,\theta)\! Pareto Failed to parse (Missing texvc executable; please see math/README to configure.): x_{m},\ k\! Failed to parse (Missing texvc executable; please see math/README to configure.): \max\{\,x_{(n)},x_{m}\}, k+n\!
Exponential λ (rate) Gamma Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha,\ \beta\!
[4]  
Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha+n,\ \beta+\sum_{i=1}^n x_i\!
Normal
with known variance σ2
μ (mean) Normal Failed to parse (Missing texvc executable; please see math/README to configure.): \mu_0, \sigma_0^2\! Failed to parse (Missing texvc executable; please see math/README to configure.): (\frac{\mu_0}{\sigma_0^2} + \frac{\sum_{i=1}^n x_i}{\sigma^2})/(\frac{1}{\sigma_0^2} + \frac{n}{\sigma^2}), (\frac{1}{\sigma_0^2} + \frac{n}{\sigma^2})^{-1}
Normal
with known precision τ
μ (mean) Normal Failed to parse (Missing texvc executable; please see math/README to configure.): \mu_0, \tau_0\! Failed to parse (Missing texvc executable; please see math/README to configure.): (\tau_0 \mu_0 + \tau \sum_{i=1}^n x_i)(\tau_0 + n \tau), \tau_0 + n \tau
Normal
with known mean μ
σ2 (variance) Scaled inverse chi-square Failed to parse (Missing texvc executable; please see math/README to configure.): \nu,\ \sigma_0^2\! Failed to parse (Missing texvc executable; please see math/README to configure.): \nu+n,\frac{\nu\sigma_0^2+\sum_{i=1}^n (x_i-\mu)^2}{\nu+n}\!
Normal
with known mean μ
τ (precision) Gamma Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha,\ \beta\!

[4]

Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha+\frac{n}{2},\beta+\frac{\sum_{i=1}^n (x_i-\mu)^2}{2}\!
Normal
with known mean μ
σ2 (variance) Inverse Gamma Distribution Failed to parse (Missing texvc executable; please see math/README to configure.): \mathbf{\alpha, \beta}
[4]  
Failed to parse (Missing texvc executable; please see math/README to configure.): \mathbf{\alpha}+\frac{n}{2} , \mathbf{\beta} + \frac{\sum_{i=1}^n{(x_i-\mu)^2}}{2}
Normal μ and σ2
Assuming dependence
Normal-Scaled inverse gamma Failed to parse (Missing texvc executable; please see math/README to configure.): m,\ u,\ \nu,\ \sigma^2\ Failed to parse (Missing texvc executable; please see math/README to configure.): \frac{um+n\bar{x}}{u+n},u+n, \nu+n, \frac{\nu\sigma^2+(n-1)S^2}{\nu+n}+\frac{nu(\bar{x}-m)^2}{(u+n)(\nu+n)}

, where Failed to parse (Missing texvc executable; please see math/README to configure.): \bar{x}

is the sample mean and Failed to parse (Missing texvc executable; please see math/README to configure.):  S^2 
is the sample variance.
Normal μ and τ
Assuming dependence
Normal-gamma Failed to parse (Missing texvc executable; please see math/README to configure.): m,\ u,\ \alpha,\ \beta\ Failed to parse (Missing texvc executable; please see math/README to configure.): \frac{um+n\bar{x}}{u+n},u+n, \alpha+\frac{n}{2}, \beta+\frac{nS^2}{2}+\frac{nu(\bar{x}-m)^2}{2(n+u)}

, where Failed to parse (Missing texvc executable; please see math/README to configure.): \bar{x}

is sample mean and Failed to parse (Missing texvc executable; please see math/README to configure.):  S^2 
is the sample variance.
Multivariate normal with known covariance matrix μ (mean vector) Multivariate normal Failed to parse (Missing texvc executable; please see math/README to configure.): \mathbf{\mu}_0, \Sigma_0 Failed to parse (Missing texvc executable; please see math/README to configure.): \left(\Sigma_0^{-1} + n\Sigma^{-1}\right)^{-1}\left( \Sigma_0^{-1}\mu_0 + n \Sigma^{-1} \bar{x} \right), \left(\Sigma_0^{-1} + n\Sigma^{-1}\right)^{-1}

, where Failed to parse (Missing texvc executable; please see math/README to configure.): \bar{x}

is the sample mean.
Multivariate normal Σ (variance matrix) Inverse-Wishart
Pareto k (shape) Gamma Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha, \beta\! Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha+n,\ \beta+\sum_{i=1}^n \ln\frac{x_i}{x_{\mathrm{m}}}\!
Pareto xm (location) Pareto
Gamma
with known shape α
β (inverse scale) Gamma Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha_0, \beta_0\! Failed to parse (Missing texvc executable; please see math/README to configure.): \alpha_0+\alpha, \beta_0+x\!

, (if Failed to parse (Missing texvc executable; please see math/README to configure.): n=1\! )

Gamma [5] α (shape), β (inverse scale) Failed to parse (Missing texvc executable; please see math/README to configure.): \frac{1}{Z} \frac{p^{\alpha-1} e^{-\beta q}}{\Gamma(\alpha)^r \beta^{-\alpha s}} Failed to parse (Missing texvc executable; please see math/README to configure.): p, q, r, s \! Failed to parse (Missing texvc executable; please see math/README to configure.): p \prod_{i=1}^n x_i, q + \sum_{i=1}^n x_i, r + n, s + n \!

References

  1. ^ Howard Raiffa and Robert Schlaifer. Applied Statistical Decision Theory. Division of Research, Graduate School of Business Administration, Harvard University, 1961.
  2. ^ Jeff Miller et al. Earliest Known Uses of Some of the Words of Mathematics, "conjugate prior distributions". Electronic document, revision of November 13, 2005, retrieved December 2, 2005.
  3. ^ Andrew Gelman, John B. Carlin, Hal S. Stern, and Donald B. Rubin. Bayesian Data Analysis, 2nd edition. CRC Press, 2003. ISBN 1-58488-388-X.
  4. ^ a b c d β is rate or inverse scale. In parameterization of wiki gamma page,θ = 1/β and k = α.
  5. ^ Fink, D. 1995 A Compendium of Conjugate Priors. In progress report: Extension and enhancement of methods for setting data quality objectives. (DOE contract 95‑831).


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